Model_id Action ARO_name ARO_category Changes To Summary _timestamp N/A N/A N/A N/A NEW: 2016-11-08T01:42:40+00:00 , OLD: 2016-10-05T13:13:32+00:00 2092 UPDATE Enterobacter aerogenes acrR mutation resulting in antibiotic resistance chloramphenicol resistance gene; gene modulating antibiotic efflux; fluoroquinolone resistance gene; efflux pump conferring antibiotic resistance; antibiotic resistant gene variant or mutant; tetracycline resistance gene; rifampin resistance gene; beta-lactam resistance gene; ARO_name "UPDATED ARO_name with Enterobacter aerogenes acrR mutation conferring antibiotic resistance " 783 UPDATE NDM-1 antibiotic inactivation enzyme; beta-lactam resistance gene; model_sequences "UPDATED fmax with 3219 UPDATED strand with - UPDATED accession with FN396876 UPDATED fmin with 2406 UPDATED sequence with TCAGCGCAGCTTGTCGGCCATGCGGGCCGTATGAGTGATTGCGGCGCGGCTATCGGGGGCGGAATGGCTCATCACGATCATGCTGGCCTTGGGGAACGCCGCACCAAACGCGCGCGCTGACGCGGCGTAGTGCTCAGTGTCGGCATCACCGAGATTGCCGAGCGACTTGGCCTTGCTGTCCTTGATCAGGCAGCCACCAAAAGCGATGTCGGTGCCGTCGATCCCAACGGTGATATTGTCACTGGTGTGGCCGGGGCCGGGGTAAAATACCTTGAGCGGGCCAAAGTTGGGCGCGGTTGCTGGTTCGACCCAGCCATTGGCGGCGAAAGTCAGGCTGTGTTGCGCCGCAACCATCCCCTCTTGCGGGGCAAGCTGGTTCGACAACGCATTGGCATAAGTCGCAATCCCCGCCGCATGCAGCGCGTCCATACCGCCCATCTTGTCCTGATGCGCGTGAGTCACCACCGCCAGCGCGACCGGCAGGTTGATCTCCTGCTTGATCCAGTTGAGGATCTGGGCGGTCTGGTCATCGGTCCAGGCGGTATCGACCACCAGCACGCGGCCGCCATCCCTGACGATCAAACCGTTGGAAGCGACTGCCCCGAAACCCGGCATGTCGAGATAGGAAGTGTGCTGCCAGACATTCGGTGCGAGCTGGCGGAAAACCAGATCGCCAAACCGTTGGTCGCCAGTTTCCATTTGCTGGCCAATCGTCGGGCGGATTTCACCGGGCATGCACCCGCTCAGCATCAATGCAGCGGCTAATGCGGTGCTCAGCTTCGCGACCGGGTGCATAATATTGGGCAATTCCAT UPDATED NCBI_taxonomy_name with Klebsiella pneumoniae UPDATED NCBI_taxonomy_id with 573 UPDATED NCBI_taxonomy_cvterm_id with 35915 UPDATED GI with CAZ39946.1 UPDATED sequence with MELPNIMHPVAKLSTALAAALMLSGCMPGEIRPTIGQQMETGDQRFGDLVFRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFGPLKVFYPGPGHTSDNITVGIDGTDIAFGGCLIKDSKAKSLGNLGDADTEHYAASARAFGAAFPKASMIVMSHSAPDSRAAITHTARMADKLR " 1340 UPDATE mtrC efflux pump conferring antibiotic resistance; gene modulating antibiotic efflux; ARO_category "UPDATED category_aro_name with gene modulating antibiotic efflux UPDATED category_aro_cvterm_id with 36590 UPDATED category_aro_accession with 3000451 UPDATED category_aro_description with Genes that directly or indirectly change rates of antibiotic efflux. " 453 UPDATE mtrE efflux pump conferring antibiotic resistance; gene modulating antibiotic efflux; ARO_category "UPDATED category_aro_name with gene modulating antibiotic efflux UPDATED category_aro_cvterm_id with 36590 UPDATED category_aro_accession with 3000451 UPDATED category_aro_description with Genes that directly or indirectly change rates of antibiotic efflux. " _version N/A N/A N/A N/A NEW: 1.1.2 , OLD: 1.1.1 1607 UPDATE PBP1a antibiotic resistant gene variant or mutant; beta-lactam resistance gene; ARO_name; ARO_category; model_param; model_type; model_description; model_type_id "UPDATED ARO_name with Streptococcus pneumoniae PBP1a conferring resistance to amoxicillin DELETED 36520 UPDATED category_aro_name with antibiotic resistant gene variant or mutant UPDATED category_aro_cvterm_id with 35950 UPDATED category_aro_accession with 0000031 UPDATED category_aro_description with Resistance to antibiotics is often conferred by single nucleotide polymorphisms (SNPs) and other mutations in target genes. UPDATED 4484 with N609D UPDATED 4483 with S575T UPDATED 4484 with N609D UPDATED 4483 with S575T UPDATED param_type with single resistance variant UPDATED param_type_id with 36301 UPDATED param_description with A mutation or sequence variant that confers elevated resistance to antibiotic(s) relative to wild type. The most common encoded in the CARD is an amino acid substitution gleaned from the literature with format [wild-type][position][mutation], e.g. R184Q. Single or multiple amino acid substitutions can be present in a single gene or across multiple genes to confer resistance to antibiotic(s). In addition, there are insertions and deletions within genome sequences that confer elevated resistance towards antibiotic(s). UPDATED model_type with protein variant model UPDATED model_description with A model to detect proteins that confer elevated resistance to antibiotic(s) relative to wild type. These models include reference sequences (which may or may not be a wild type sequence), a curated BLASTP cut-off, and mapped resistance variants. UPDATED model_type_id with 40293 " 2294 UPDATE Campylobacter jejuni gyrA conferring resistance to fluoroquinolone antibiotic resistant gene variant or mutant; fluoroquinolone resistance gene; ARO_name "UPDATED ARO_name with Campylobacter jejuni gyrA conferring resistance to fluoroquinolones " 1035 UPDATE PBP2b antibiotic resistant gene variant or mutant; beta-lactam resistance gene; ARO_name; model_sequences; ARO_category; model_param; model_type; model_description; model_type_id "UPDATED ARO_name with Streptococcus pneumoniae PBP2b conferring resistance to amoxicillin UPDATED fmax with 1496273 UPDATED strand with - UPDATED accession with NC_003098.1 UPDATED fmin with 1494215 UPDATED sequence with CTAATTCATTGGATGGTATTTTTGATACAGATTGATAATGTCACGCGCAATGGAAGGTCCTACACCATTTGTTAGATTGGTATTATGAGGAAAGACCACTGCGACAGCGATTTGGGGATTATCAGATGGGGCATAGGCCACCGCATTGGTATTGGTTGCTTGCTGACCATCTGCCACATAGCTTTCGGCTGTACCTGTTTTTCCGCTAATGGATACCAAGGCACCATTTGAAAAGGCACGTCCAGTTGTCAATCCACTAGTACCATGGGCAACCTGATAAAAACCTTGGTGCAAGATGCTCATATCGGAGTCGGATATATTGACCTTATTCATCTCTGTCGGTTGCAGTTGCTGAATCAAGTCACCCAGTCCTCCCTTATCATTATTACCATAAATGCCTTCAACAATACGAGGAGCCACACGAACACCATTATTTGCAATAGTTGCTACATACTGAGCCAACTGCATCGGCGTATAGTTATCAAACTGCCCAAAGGCATTAGTAATGTAATTAGCAAAGCTATACTCTTTGGGAACAAATCCAGTAGATTCATCTGGTAGGTCAATTCCTGTCGCAGTACCCAAGCCATATTCGCCAAAGGTTGAACGCAGTTTCTCCATAGCAGACTCTAGATTGCTGGTGCCGACAAACATATTGGGTTGATAGGTTTGCCCCATAAGACCTAAGGCTGTTTGGACCATATAGGTATTTGATGAATACTCCAGAGCTTGGACCGCTGTGATAGGGAATGAACCGTAAGCCTGAGTATACCAAGAATTGATGGGAGCTGAACCTTGGAAGACAATGGACTGGTCTGTCAAGGTCTGGTTTCCTGACAAGACTCCATTTTCCCAACCTGAGCTGATGGTCGCCGCCTTGACAACCGAACCTGGAACAAAGACATTGGTTACCGTTCCCAAGGAATCAGGCGTCAACTCTCCCGTTTTCAAGTCATGTTTAATCCCTGACATAGACAAAACCGCACCTGTTTTTGGGTTAAGGGCGACTGCATAGACACCTTCAGAATACTTGGCTCCACCATTTTCTAGCTCAGAATTGAAATAACTTTTCAGTAAAGCATCCACGCTATCTTGGAAAGCCAAATCAATGGTCAGTTTGATATTGTTTCCCTTACTACCTTCCTCAATTGTATCCACGCTTTCCATATTGCCATATTTATCCAGATGGATTTCTTTTACCGAGCGTTTTCCTTGTAAGGTCTCTTCATATTGCTTTTCCAAATAGGAGGTTCCTACACGGTCATTTAGAGAATAGCCTTTTTTAAGATAGGCTTCTGCTTCTTCCGCTGGGAGACCAGCTTTTTCACTGGATACACTCCCAACTATAGAAGAAAGGGAAGTTTCCAAAACCTTTCTATCCCAAGAAGTAGAAATACTAATGCCAGGCATCTCCTTTGAAATAGAGGCAATAACAGCCACCTGAGAATCATTTAGAGGATCTGTAGCAATGGTTCCTGTCGCAAAGTTTCCAACAGCATTTAACTGACTAAAAAGATAGATTTCTTTCTTTTCATCCTCTGTATAGTTTAGTTGACTCGTTTGTACACTATCGACCGCATTGTTATACAGTTCTGATTCGGATAGACGATTGCCATCTGAATCCAAGCGTTTCTCGCTTGGGAGAGCTTCCACTATTTTTTTATAGATTTCAGGATCAGCCAAATAGTAATCCGCCAGCTGGCGTTCTGTCAAATTTGGAGAACTGATGCTCACATAAGTCAGTAACTTTTTAGCTGTTTCTTTTAAGTCTGTAGCCGTCATTTTATTGCTACGCGTAAAGGAAACAACCTGCTTTAACGTATTTTCTACCAAAGGTTTTCCACTAGCATCATAAATTTCCCCACGGGCTGAACTGCTTGTAATCTTGGTCTGACTAGCTGAGGCTAGCTTTTTTTCGTAAAAATCCTTGTTCAAAACCTGCATATACAACAAACGACCAATAATGGTCATAAAGAGTAAAATGACGATTGAAAACAATAAATTAAGCCGAATCGGAATCGAATGGCTGTTAAATTTTCTCATACAAATCAGTCTCAT UPDATED NCBI_taxonomy_name with Streptococcus pneumoniae R6 UPDATED NCBI_taxonomy_id with 171101 UPDATED NCBI_taxonomy_cvterm_id with 39596 UPDATED GI with NP_359110.1 UPDATED sequence with MRLICMRKFNSHSIPIRLNLLFSIVILLFMTIIGRLLYMQVLNKDFYEKKLASASQTKITSSSARGEIYDASGKPLVENTLKQVVSFTRSNKMTATDLKETAKKLLTYVSISSPNLTERQLADYYLADPEIYKKIVEALPSEKRLDSDGNRLSESELYNNAVDSVQTSQLNYTEDEKKEIYLFSQLNAVGNFATGTIATDPLNDSQVAVIASISKEMPGISISTSWDRKVLETSLSSIVGSVSSEKAGLPAEEAEAYLKKGYSLNDRVGTSYLEKQYEETLQGKRSVKEIHLDKYGNMESVDTIEEGSKGNNIKLTIDLAFQDSVDALLKSYFNSELENGGAKYSEGVYAVALNPKTGAVLSMSGIKHDLKTGELTPDSLGTVTNVFVPGSVVKAATISSGWENGVLSGNQTLTDQSIVFQGSAPINSWYTQAYGSFPITAVQALEYSSNTYMVQTALGLMGQTYQPNMFVGTSNLESAMEKLRSTFGEYGLGTATGIDLPDESTGFVPKEYSFANYITNAFGQFDNYTPMQLAQYVATIANNGVRVAPRIVEGIYGNNDKGGLGDLIQQLQPTEMNKVNISDSDMSILHQGFYQVAHGTSGLTTGRAFSNGALVSISGKTGTAESYVADGQQATNTNAVAYAPSDNPQIAVAVVFPHNTNLTNGVGPSIARDIINLYQKYHPMN DELETED 36520 UPDATED category_aro_name with antibiotic resistant gene variant or mutant UPDATED category_aro_cvterm_id with 35950 UPDATED category_aro_accession with 0000031 UPDATED category_aro_description with Resistance to antibiotics is often conferred by single nucleotide polymorphisms (SNPs) and other mutations in target genes. UPDATED 4480 with T445A UPDATED 4481 with E475G UPDATED 4482 with T488A UPDATED 4480 with T445A UPDATED 4481 with E475G UPDATED 4482 with T488A UPDATED param_type with single resistance variant UPDATED param_type_id with 36301 UPDATED param_description with A mutation or sequence variant that confers elevated resistance to antibiotic(s) relative to wild type. The most common encoded in the CARD is an amino acid substitution gleaned from the literature with format [wild-type][position][mutation], e.g. R184Q. Single or multiple amino acid substitutions can be present in a single gene or across multiple genes to confer resistance to antibiotic(s). In addition, there are insertions and deletions within genome sequences that confer elevated resistance towards antibiotic(s). UPDATED model_type with protein variant model UPDATED model_description with A model to detect proteins that confer elevated resistance to antibiotic(s) relative to wild type. These models include reference sequences (which may or may not be a wild type sequence), a curated BLASTP cut-off, and mapped resistance variants. UPDATED model_type_id with 40293 " 320 UPDATE PBP2x antibiotic resistant gene variant or mutant; beta-lactam resistance gene; ARO_name; ARO_category; model_param; model_type; model_description; model_type_id "UPDATED ARO_name with Streptococcus pneumoniae PBP2x conferring resistance to amoxicillin DELETED 36520 UPDATED category_aro_name with antibiotic resistant gene variant or mutant UPDATED category_aro_cvterm_id with 35950 UPDATED category_aro_accession with 0000031 UPDATED category_aro_description with Resistance to antibiotics is often conferred by single nucleotide polymorphisms (SNPs) and other mutations in target genes. UPDATED 4479 with M339F UPDATED 4478 with M400T UPDATED 4473 with I371T UPDATED 4475 with N514H UPDATED 4474 with R384G UPDATED 4477 with N605T UPDATED 4476 with L546V UPDATED 4479 with M339F UPDATED 4478 with M400T UPDATED 4473 with I371T UPDATED 4475 with N514H UPDATED 4474 with R384G UPDATED 4477 with N605T UPDATED 4476 with L546V UPDATED param_type with single resistance variant UPDATED param_type_id with 36301 UPDATED param_description with A mutation or sequence variant that confers elevated resistance to antibiotic(s) relative to wild type. The most common encoded in the CARD is an amino acid substitution gleaned from the literature with format [wild-type][position][mutation], e.g. R184Q. Single or multiple amino acid substitutions can be present in a single gene or across multiple genes to confer resistance to antibiotic(s). In addition, there are insertions and deletions within genome sequences that confer elevated resistance towards antibiotic(s). UPDATED model_type with protein variant model UPDATED model_description with A model to detect proteins that confer elevated resistance to antibiotic(s) relative to wild type. These models include reference sequences (which may or may not be a wild type sequence), a curated BLASTP cut-off, and mapped resistance variants. UPDATED model_type_id with 40293 " 2033 UPDATE mtrR gene modulating antibiotic efflux; ARO_category "DELETED 36298 " 2403 UPDATE Salmonella enterica gyrA conferring resistance to fluoroquinolones antibiotic resistant gene variant or mutant; fluoroquinolone resistance gene; ARO_description "UPDATED ARO_description with Point mutations in Salmonella gyrA that confer resistance to Nalidixic acid, a fluoroquinolone antibiotic. These mutations have also been shown to reduce susceptibility to ciprofloxacin. " 6 UPDATE acrA chloramphenicol resistance gene; fluoroquinolone resistance gene; efflux pump conferring antibiotic resistance; tetracycline resistance gene; rifampin resistance gene; beta-lactam resistance gene; model_sequences "DELETED 3588 UPDATED fmax with 1245553 UPDATED strand with - UPDATED accession with NC_016845.1 UPDATED fmin with 1244359 UPDATED sequence with TTAAGACTTGGTTTGTTCTGATGGCGCGTTGCCTGCGGCTTGCTGTTTATCATCAGAAGCTACTTCCTGCGCTTTTACCTGCACACCTGGTTTGATTTTTTGCAGGCCGGTGACGATAACGCGATCGCCGGATTTCAGACCGTCAGTGACCAGCCATTTATCGCCGATCGCCTGAGAAGCAGTGACCTGGCGGACTTCGACTTTATCGCCTTCCCCCACTACCATGACGCTGGCGTCGCCGCGCGGCGTACGGGTAACACCCTGTTGCGGTACCAGCAGGGCGTCAGGGTTAATCCCTTCTTCCAGACGGGCACGGACGAACATCCCCGGTAGCAGGGTGTGATCCGGGTTCGGGAAAATAGCGCGTAGCGTGATTGAGCCGGTGGTCTGATCGACGGTGACATCCGAGAATTCCAGCGTGCCGGACTGCGGATACTTAAGACCGTCATTAGTCACTAGCTCCACTTTCGCTTTGCCGTTTTCCTGTTTCAGGCGGCCGTCGGCTAGCTCCTGCTTCAGGCGCAGGAAATCATTGCTCGACTGGGTGACGTCAACATAGATCGGATCCAGCTGCTGAACGGTTGCCAGGGCGGTCGTTTGACCATTCTGTACCAGCGCCCCTTCGGTCACGGTGGATTTACCAATCCGGCCGCTGATCGGCGAGGTGACTTTGGTGTAGGCCAGATTGATGCGCGCGGTTTCAACGGCCGCTTTCGCCGCGACCACGGCCGCATTGCTCTGCTGCGCCGTCGCAACGGCGGTATCGTAGTCTTGTTGACTAATATATTTGGTGCCCAACAGTTTCTGATAACGCTTGACCGTCAGTTGATCCATGTTTGCCGCCGCCTGGGCTTTTGCCAGGTCGCCTTTGGCGCTGTCATAGCTGGCCTGATAGGTGGCTGGATCGATCTGATACAGGGAGACGCCGGCCTGGATATCGCTACCTTCCACGAAGTTACGTTTTAAAATAATGCCACTGACCTGAGGACGGACTTCCGCAATGCGATAGGCGCTGGTGCGGCCTGGCAGTTCGGTGGTTATTTGTAGAGGTGCGGATTTGAGCGTCACAATACCGACTTCCGGCATGTGCTGGGCTCCCTGTTGAGCCGGTTTATCGTCACATCCTGTTAGCGCTAAGCTGCCTGAGAGCATCAGAACGACCGCCAGAGGCGTTAACCCTCTGTTTTTGTTCAT UPDATED NCBI_taxonomy_name with Klebsiella pneumoniae subsp. pneumoniae HS11286 UPDATED NCBI_taxonomy_id with 1125630 UPDATED NCBI_taxonomy_cvterm_id with 40663 UPDATED GI with YP_005225489.1 UPDATED sequence with MNKNRGLTPLAVVLMLSGSLALTGCDDKPAQQGAQHMPEVGIVTLKSAPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFVEGSDIQAGVSLYQIDPATYQASYDSAKGDLAKAQAAANMDQLTVKRYQKLLGTKYISQQDYDTAVATAQQSNAAVVAAKAAVETARINLAYTKVTSPISGRIGKSTVTEGALVQNGQTTALATVQQLDPIYVDVTQSSNDFLRLKQELADGRLKQENGKAKVELVTNDGLKYPQSGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGINPDALLVPQQGVTRTPRGDASVMVVGEGDKVEVRQVTASQAIGDKWLVTDGLKSGDRVIVTGLQKIKPGVQVKAQEVASDDKQQAAGNAPSEQTKS " 810 UPDATE mecC antibiotic resistance gene cluster, cassette, or operon; beta-lactam resistance gene; antibiotic target replacement protein; model_sequences "UPDATED fmax with 37678 UPDATED strand with - UPDATED accession with NC_017349.1 UPDATED fmin with 35680 UPDATED sequence with TTACTGATCTATATCAAATTGAGTTTTTCCATTATCATACAAATCATCATAAACTTTTCCAGATATAGTAGCATTATAGCTGGCCATCCCTTTATTTTGAACGTCTTTAACATTAATCGCCATTAACATATTAGGATTATTTTTATTATATGAAACAAACCAACCTATTTGTCTTCCAGTTTCCCCTTGATTCATTTTTAATTCTGCTGTGCCAGATTTACCAATAATTCGGGCATAATTTTTGTATATATCATCCCTATGTGTTTTATTAACTACACGTTCCATACCATTAGTTAATATATCTATGTCTTTTTTAGGTATAATATCTTTTTTCCATATTTGAGATTTTGTTTTACGTAAAACATGAGGATTTTGTATATTTCCGTTATTTTCTAAAGCACTGTATATTGATAAAATTTGTATAGGGTTTACTAGTATCTCGCCTTGGCCATATCCTGAATCTGCTAATAATATTTCATTTTTTAAATTACTATTTGAGATTTGTGCTTTATAAAAGGGATAATCACTCGGGATATTTTCACCGATTCCCAAATCTTGCATACCTTGCTCAAATTTTTTGGCTCCTAATGCTAATGCAATGCGGGCAAAAAATATGTTGTCTGATGATTCTATTGCTTGCTTTAAATCGATATTGCCGTCTACTACTTTAAATCTTGTGATATTATAATTCCCCCATGATGCATCTTTTTGCCAACCCTTACCATAAATATCAAAATTAGTATTTTTGTCTAGTTTATTTTCTTTTAAGGCTATAATAGATGTTAATATTTTTTGGGTTGAACCTGGTGATGTAGTGATTTGAAATTTGTTGAGCAAAGGCTCTTTTTTATTGTTAGTTAATTTACGGTAGTCATTATTGCTTAATCCATTCATGAATGGATAAACATCGTACGATGGGGTACTTACCAAAGCTAAAATTTCTCCAGTTTTTGGTTGTAATGCTGTACCAGATCCATCGTCATTTTTCATATGTTTATAAATACTTTCTTGTACTCTAGCATCTATAGTTAAATGAAGATCTTTTCCGTTTTCAGCCTTTTTCTCCAATAATGTGTCTAAAGGTTTATTGTCATAAGTATTTGCAATGGATACCTTAAAACCATCAGTGTTTTGCAATTGTTTATCATAGAGGCGTTCTAAGCCTTTTTTTCCAATAACAGTATTTTTGCTATAGTTTCTAAATTGCTTACTTTTTAACTCGTCAGAATTAATTGGACCCACATAACCTAAAAGGTGTACTGTTGCTTCGTTCAATGGATAAACACGGCTTTTTATAGTGTTTATTTGTAAATTGTATGATTTAATTAATTTGTCTATATATTCATCTTGTTTATTTATCTTTTTAATTGGTACAAATGAATCTGGCTGAACCCATTTTTGATTAACTTTATTGGTTATAGCTTTTGTATCAATTTGTAAGTCACGAGCAATATCATCATATTTTTCTTTGGGTGTTTTGTTAGGGACAATACCGATTTCATATGTATTTCCAGTTTTAGCTAATTCTATACCATTTCTATCTTTTATTTTGCCTCGCTCTGATTTTAATGTTTCTATATTAATTTTCTGTCCATTTTTCAAACCAGGTACTATTACGTCTGGTCTCCAATCTAATTTCCAATGCTTATCTTCATAAATAAAGTTTAATTGTGTATTACGTCGTATAGTTCCATATTTTGTATATATGTTATATTTAACATCAACTTGCTTTTTATCTTTTCCAGTTTTTTTAATTTCATGATTAGTAATTTTTAAGTTATTGACACTTAAATCTTTGTAAATTTTTTTATTCCTATCTACAATTTCTTCTTCTCCATATGCCAGTTTAGATTTTTCTGAACTATTTTTATATACTTCGTTATAGTTTCCTTTTTCAATAGAACTAATTGTTTTCTCAATATCGTCATCTTTGAATAACCAAGTTATTATAATCATAATTAGTAAAAGAACTAGCACACTAATATAAATTTTTTTCAT UPDATED NCBI_taxonomy_name with Staphylococcus UPDATED NCBI_taxonomy_id with 1279 UPDATED NCBI_taxonomy_cvterm_id with 37074 UPDATED GI with WP_000725529.1 UPDATED sequence with MKKIYISVLVLLLIMIIITWLFKDDDIEKTISSIEKGNYNEVYKNSSEKSKLAYGEEEIVDRNKKIYKDLSVNNLKITNHEIKKTGKDKKQVDVKYNIYTKYGTIRRNTQLNFIYEDKHWKLDWRPDVIVPGLKNGQKINIETLKSERGKIKDRNGIELAKTGNTYEIGIVPNKTPKEKYDDIARDLQIDTKAITNKVNQKWVQPDSFVPIKKINKQDEYIDKLIKSYNLQINTIKSRVYPLNEATVHLLGYVGPINSDELKSKQFRNYSKNTVIGKKGLERLYDKQLQNTDGFKVSIANTYDNKPLDTLLEKKAENGKDLHLTIDARVQESIYKHMKNDDGSGTALQPKTGEILALVSTPSYDVYPFMNGLSNNDYRKLTNNKKEPLLNKFQITTSPGSTQKILTSIIALKENKLDKNTNFDIYGKGWQKDASWGNYNITRFKVVDGNIDLKQAIESSDNIFFARIALALGAKKFEQGMQDLGIGENIPSDYPFYKAQISNSNLKNEILLADSGYGQGEILVNPIQILSIYSALENNGNIQNPHVLRKTKSQIWKKDIIPKKDIDILTNGMERVVNKTHRDDIYKNYARIIGKSGTAELKMNQGETGRQIGWFVSYNKNNPNMLMAINVKDVQNKGMASYNATISGKVYDDLYDNGKTQFDIDQ " 1938 UPDATE mtrD efflux pump conferring antibiotic resistance; gene modulating antibiotic efflux; ARO_category "UPDATED category_aro_name with gene modulating antibiotic efflux UPDATED category_aro_cvterm_id with 36590 UPDATED category_aro_accession with 3000451 UPDATED category_aro_description with Genes that directly or indirectly change rates of antibiotic efflux. " 293 UPDATE SHV-180 antibiotic inactivation enzyme; beta-lactam resistance gene; model_sequences "UPDATED fmax with 861 UPDATED strand with + UPDATED accession with KP050487.1 UPDATED fmin with 0 UPDATED sequence with ATGCGTTATATTCGCCTGTGTATTATCTCCCTGTTAGCCACCCTGCCGCTGGCGGTACACGCCAGCCCGCAGCCGCTTGAGCAAATTAAACTAAGCGAAAGCCAGCTGTCGGGCCACGTAGGCATGATAGAAATGGATCTGGCCAGCGGCCGCACGCTGACCGCCTGGCGCGCCGATGAACGCTTTCCCATGATGAGCACCTTTAAAGTAGTGCTCTGCGGCGCAGTGCTGGCGCGGGTGGATGCCGGTGACGAACAGCTGGAGCGAAAGATCCACTATCGCCAGCAGGATCTGGTGGACTACTCGCCGGTCAGCGAAAAACACCTTGCCGACGGCATGACGGTCGGCGAACTCTGCGCCGCCGCCATTACCATGAGCGATAACAGCGCCGCCAATCTGCTGCTGGCCACCGTCGGCGGCCCCGCAGGATTGACTGCCTTTTTGCGCCAGATCGGCGACAACGTCACCCGCCTTGACCGCTGGGAAACGGAACTGAATGAGGCGCTTCCCGGCGACGCCCGCGACACCACTACCCCGGCCAGCATGACCGCGACCCTGCGCAAGCTGCTGACCAGCCAGCGTCTGAGCGCCCGTTCGCAACGGCAGCTGCTGCAGTGGATGGTGGACGATCGGGTCGCCGGACCGTTGATCCGCTCCGTGCTGCCGGCGGGCTGGTTTATCGCCGATAAGACCGGAGCTGGCGAGCGGGGTGCGCGCGGCATTGTCGCCCTGCTTGGCCCGAATAACAAAGCAGAGCGCATTGTGGTGATTTATCTGCGGGATACGCCGGCGAGCATGGCCGAGCGAAATCAGCAAATCGCCGGGATCGGCGCGGCGCTGATCGAGCACTGGCAACGCTAA UPDATED NCBI_taxonomy_name with Klebsiella pneumoniae UPDATED NCBI_taxonomy_id with 573 UPDATED NCBI_taxonomy_cvterm_id with 35915 UPDATED GI with AJO16040.1 UPDATED sequence with MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGHVGMIEMDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMTATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTGAGERGARGIVALLGPNNKAERIVVIYLRDTPASMAERNQQIAGIGAALIEHWQR " 431 UPDATE Escherichia coli marR mutant resulting in antibiotic resistance chloramphenicol resistance gene; gene modulating antibiotic efflux; fluoroquinolone resistance gene; efflux pump conferring antibiotic resistance; antibiotic resistant gene variant or mutant; tetracycline resistance gene; rifampin resistance gene; beta-lactam resistance gene; ARO_name "UPDATED ARO_name with Escherichia coli marR mutant conferring antibiotic resistance " 259 DELETE PBP1b antibiotic target replacement protein; beta-lactam resistance gene; N/A N/A 2433 ADD lrfA efflux pump conferring antibiotic resistance; N/A N/A 2432 ADD Klebsiella OmpK35 conferring resistance to beta-lactam gene modulating permeability to antibiotic; gene conferring resistance via absence; N/A N/A 2431 ADD hp1184 efflux pump conferring antibiotic resistance; N/A N/A 2430 ADD hp1181 efflux pump conferring antibiotic resistance; N/A N/A 2436 ADD D-Ala-D-Ala ligase glycopeptide resistance gene; gene conferring antibiotic resistance via molecular bypass; N/A N/A 2435 ADD lmrP efflux pump conferring antibiotic resistance; N/A N/A 2434 ADD Klebsiella OmpK36 conferring resistance to beta-lactam gene modulating permeability to antibiotic; gene conferring resistance via absence; N/A N/A 2409 ADD Neisseria meningititis PBP2 conferring resistance to beta-lactam antibiotic resistant gene variant or mutant; beta-lactam resistance gene; N/A N/A 2428 ADD farA efflux pump conferring antibiotic resistance; gene modulating antibiotic efflux; N/A N/A 2429 ADD farB efflux pump conferring antibiotic resistance; gene modulating antibiotic efflux; N/A N/A 2420 ADD drrC efflux pump conferring antibiotic resistance; N/A N/A 2421 ADD efrA efflux pump conferring antibiotic resistance; N/A N/A 2422 ADD efrB efflux pump conferring antibiotic resistance; N/A N/A 2423 ADD msbA efflux pump conferring antibiotic resistance; N/A N/A 2424 ADD YojI efflux pump conferring antibiotic resistance; N/A N/A 2425 ADD hmrM efflux pump conferring antibiotic resistance; N/A N/A 2426 ADD efmA efflux pump conferring antibiotic resistance; N/A N/A 2427 ADD efpA efflux pump conferring antibiotic resistance; N/A N/A 2411 ADD Shigella flexneri gyrA conferring resistance to fluoroquinolones antibiotic resistant gene variant or mutant; fluoroquinolone resistance gene; N/A N/A 2410 ADD Salmonella enterica parC conferring resistance to fluoroquinolones antibiotic resistant gene variant or mutant; fluoroquinolone resistance gene; N/A N/A 2412 ADD Shigella flexneri parC conferring resistance to fluoroquinolones antibiotic resistant gene variant or mutant; fluoroquinolone resistance gene; N/A N/A 2416 ADD abcA efflux pump conferring antibiotic resistance; tetracycline resistance gene; gene modulating antibiotic efflux; fluoroquinolone resistance gene; N/A N/A 2419 ADD drrB efflux pump conferring antibiotic resistance; N/A N/A 2418 ADD drrA efflux pump conferring antibiotic resistance; N/A N/A