protein homolog model

Accession MO:0000009
DefinitionThe protein homolog model is an AMR detection model. Protein homolog models detect a protein sequence based on its similarity to a curated reference sequence. A protein homolog model has only one parameter: a curated BLASTP bitscore cutoff for determining the strength of a match. Protein homolog model matches to reference sequences are categorized on three criteria: perfect, strict and loose. A perfect match is 100% identical to the reference sequence along its entire length; a strict match is not identical but the bitscore of the matched sequence is greater than the curated BLASTP bitscore cutoff. Loose matches are other sequences with a match bitscore less than the curated BLASTP bitscore.
Classification1 ontology terms | Show
Parent Term(s)1 ontology terms | Show
2 ontology terms | Show
+ BLASTP e-value part_of
+ BLASTP bit-score part_of
Model List
Name Definition