Download

Use or reproduction of these materials, in whole or in part, by any non-academic organization whether or not for non-commercial (including research) or commercial purposes is prohibited, except with written permission of McMaster University. See the Use or Download Copyright & Disclaimer.

Exception: Ontologies at the Comprehensive Antibiotic Resistance Database are freely available under the Creative Commons CC-BY license version 4.0

The Antibiotic Resistance Ontology (ARO) and Resistance Gene Identifier (RGI) are also available at GitHub. The ARO is registered at the OBO Foundry.

A Note on Ongoing Revisions of the Antibiotic Resistance Ontology

Download Ontology Files (freely available, see README), use https://card.mcmaster.ca/latest/ontology for automated downloads
NAME ACTION
OntologyDOWNLOAD
OntologyDOWNLOAD
Download CARD Data (see README), use https://card.mcmaster.ca/latest/data for automated downloads
NAME ACTION
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
DataDOWNLOAD
Track CARD Data Changes
JSON TAB
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
DOWNLOADDOWNLOAD
Download CARD Prevalence, Resistomes, & Variants data (see README), use https://card.mcmaster.ca/latest/variants for automated downloads
NAME ACTION
Prevalence, Genomes, & Variants dataDOWNLOAD
Prevalence, Genomes, & Variants dataDOWNLOAD
PrevalenceDOWNLOAD
PrevalenceDOWNLOAD
PrevalenceDOWNLOAD
Download Software, use https://card.mcmaster.ca/latest/software for automated downloads
NAME ACTION
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI SoftwareDOWNLOAD
RGI Conda install

# searches rgi package and show available versions

$ conda search --channel bioconda rgi

# install rgi package

$ conda install --channel bioconda rgi

# install rgi specific version

$ conda install --channel bioconda rgi=3.1.1

# remove rgi package

$ conda remove --channel bioconda rgi