Accession | ARO:3002877 |
CARD Short Name | BcI |
Definition | Bacillus cereus beta-lactamase I is a class A beta-lactamase that breaks down a number of penicillins and cephalosporins in the Bacillus cereus strain 569/H/9. |
AMR Gene Family | class A Bacillus cereus Bc beta-lactamase |
Drug Class | cephalosporin |
Resistance Mechanism | antibiotic inactivation |
Resistomes with Perfect Matches | Bacillus cereuswgs |
Resistomes with Sequence Variants | Bacillus amyloliquefaciensg+wgs, Bacillus anthracisg+wgs, Bacillus cereusg+wgs, Bacillus halotoleransg+wgs, Bacillus subtilisg+wgs, Bacillus tequilensisg+wgs, Bacillus thuringiensisg+wgs, Bacillus velezensisg+p+wgs, Brevibacillus brevisg+wgs |
Classification | 12 ontology terms | Show + process or component of antibiotic biology or chemistry + mechanism of antibiotic resistance + determinant of antibiotic resistance + antibiotic inactivation [Resistance Mechanism] + antibiotic inactivation enzyme + hydrolysis of antibiotic conferring resistance + antibiotic molecule + hydrolysis of beta-lactam antibiotic by serine beta-lactamase + beta-lactam antibiotic + beta-lactamase + class A beta-lactamase + cephalosporin [Drug Class] |
Parent Term(s) | 1 ontology terms | Show + class A Bacillus cereus Bc beta-lactamase [AMR Gene Family] |
Publications | Torkar KG, et al. 2018. Microb Pathog 118:140-145 Antimicrobial susceptibility and characterization of metallo-β-lactamases, extended-spectrum β-lactamases, and carbapenemases of Bacillus cereus isolates. (PMID 29551437) |
Prevalence of BcI among the sequenced genomes, plasmids, and whole-genome shotgun assemblies available at NCBI or IslandViewer for 414 important pathogens (see methodological details and complete list of analyzed pathogens). Values reflect percentage of genomes, plasmids, genome islands, or whole-genome shotgun assemblies that have at least one hit to the AMR detection model. Default view includes percentages calculated based on Perfect plus Strict RGI hits. Select the checkbox to view percentages based on only Perfect matches to AMR reference sequences curated in CARD (note: this excludes resistance via mutation as references in protein variant models are often wild-type, sensitive sequences).
Species | NCBI Chromosome | NCBI Plasmid | NCBI WGS | NCBI GI | GRDI-AMR2 |
---|---|---|---|---|---|
Bacillus amyloliquefaciens | 100% | 0% | 98.88% | 0% | 0% |
Bacillus anthracis | 3.28% | 0% | 6.58% | 0% | 0% |
Bacillus cereus | 98.92% | 0% | 97.11% | 0% | 0% |
Bacillus halotolerans | 9.09% | 0% | 24.32% | 0% | 0% |
Bacillus subtilis | 87.46% | 0% | 86.13% | 0% | 0% |
Bacillus tequilensis | 100% | 0% | 100% | 0% | 0% |
Bacillus thuringiensis | 95% | 0% | 98.6% | 0% | 0% |
Bacillus velezensis | 98.66% | 0.9% | 98.9% | 0% | 0% |
Brevibacillus brevis | 100% | 0% | 100% | 0% | 0% |
Model Type: protein homolog model
Model Definition: Protein Homolog Models (PHM) detect protein sequences based on their similarity to a curated reference sequence, using curated BLASTP bitscore cut-offs. Protein Homolog Models apply to all genes that confer resistance through their presence in an organism, such as the presence of a beta-lactamase gene on a plasmid. PHMs include a reference sequence and a bitscore cut-off for detection using BLASTP. A Perfect RGI match is 100% identical to the reference protein sequence along its entire length, a Strict RGI match is not identical but the bit-score of the matched sequence is greater than the curated BLASTP bit-score cutoff, Loose RGI matches have a bit-score less than the curated BLASTP bit-score cut-off.
Bit-score Cut-off (blastP): 350
Curator | Description | Most Recent Edit |
---|