Salmonella gallinarum folP with mutation conferring resistance to sulfonamides

Accession ARO:3007749
CARD Short NameSgal_folP_SLF
DefinitionPoint mutations in Salmonella gallinarum dihydropteroate synthase folP altered the stability of the protein, thus conferring sulfonamide resistance.
AMR Gene Familysulfonamide resistant dihydropteroate synthase folP
Drug Classsulfonamide antibiotic
Resistance Mechanismantibiotic target alteration
Classification9 ontology terms | Show
Parent Term(s)2 ontology terms | Show
+ sulfonamide resistant dihydropteroate synthase folP [AMR Gene Family]
+ confers_resistance_to_antibiotic sulfamethoxazole [Antibiotic]
Publications

Duysak T, et al. 2023. Arch Microbiol 205(12):363 Analysis of random mutations in Salmonella Gallinarum dihydropteroate synthase conferring sulfonamide resistance. (PMID 37906281)

Resistomes

Prevalence of Salmonella gallinarum folP with mutation conferring resistance to sulfonamides among the sequenced genomes, plasmids, and whole-genome shotgun assemblies available at NCBI or IslandViewer for 413 important pathogens (see methodological details and complete list of analyzed pathogens). Values reflect percentage of genomes, plasmids, genome islands, or whole-genome shotgun assemblies that have at least one hit to the AMR detection model. Default view includes percentages calculated based on Perfect plus Strict RGI hits. Select the checkbox to view percentages based on only Perfect matches to AMR reference sequences curated in CARD (note: this excludes resistance via mutation as references in protein variant models are often wild-type, sensitive sequences).

Prevalence: protein variant model

SpeciesNCBI ChromosomeNCBI PlasmidNCBI WGSNCBI GI
No prevalence data


Detection Models

Model Type: protein variant model

Model Definition: Protein Variant Models (PVM) perform a similar search as Protein Homolog Models (PHM), i.e. detect protein sequences based on their similarity to a curated reference sequence, but secondarily screen query sequences for curated sets of mutations to differentiate them from antibiotic susceptible wild-type alleles. PVMs are designed to detect AMR acquired via mutation of house-keeping genes or antibiotic targets, e.g. a mutated gyrase resistant to aminocoumarin antibiotics. PVMs include a protein reference sequence (often from antibiotic susceptible wild-type alleles), a curated bit-score cut-off, and mapped resistance variants. Mapped resistance variants may include any or all of single point mutations, insertions, or deletions curated from the scientific literature. A Strict RGI match has a BLASTP bit-score above the curated BLASTP cutoff value and contains at least one curated mutation from amongst the mapped resistance variants, while a Loose RGI match has a bit-score less than the curated BLASTP bit-score cut-off but still contains at least one curated mutation from amongst the mapped resistance variants.

Bit-score Cut-off (blastP): 500

Legend:

  • discovered in clinical, agricultural, or environmental isolates

  • discovered via laboratory selection experiments

  • ReSeqTB https://platform.reseqtb.org

Published Variants:


>gb|WMC40549.1|+|Salmonella gallinarum folP with mutation conferring resistance to sulfonamides [Salmonella enterica subsp. enterica serovar Gallinarum]
MKLFAQGATLDLTHPHVMGILNVTPDSFSDGGAHNTLIEAVKHANLMVNAGATIIDVGGE
STRPGAAEVSVEEELDRVIPVLEAIAQRFEVWISVDTSKPEVIREATRAGAHIINDVRSL
SEPGALEAAAETGLPVSLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEKAGIAKE
KLLLDPGFGFGKNLSHNYTLLARLGEFHHFNLPLLVGMSRKTMVGQLLNVGPSDRLNGSL
ACAVIAAMQGAQIIRVHDVKETVEAMRVVEATLSAKGNKRYE



>gb|CP100648.1|+|613399-614247|Salmonella gallinarum folP with mutation conferring resistance to sulfonamides [Salmonella enterica subsp. enterica serovar Gallinarum]
ATGAAACTCTTCGCTCAGGGCGCCACGCTCGATCTCACTCATCCGCATGTTATGGGTATCCTGAACGTAACGCCGGATTCGTTCTCCGAC
GGCGGCGCGCATAACACGCTGATTGAGGCGGTGAAACATGCGAATTTAATGGTGAATGCCGGTGCGACAATTATTGATGTGGGGGGGGAA
TCAACGCGACCAGGCGCGGCGGAAGTGAGCGTGGAAGAAGAGCTGGATCGCGTTATTCCGGTACTGGAAGCAATCGCGCAACGTTTTGAA
GTGTGGATTTCTGTGGATACCTCTAAGCCCGAGGTGATCCGTGAAGCGACAAGGGCGGGCGCGCATATTATCAATGATGTCCGTTCGCTC
TCCGAGCCCGGCGCGTTGGAAGCGGCAGCGGAAACCGGCTTGCCGGTCAGTCTTATGCACATGCAGGGCAACCCCAAAACCATGCAGGAG
GCGCCGAAATATGACGATGTCTTTGCCGAGGTGAATCGCTACTTTATTGAGCAAATAGCACGTTGTGAGAAGGCCGGCATCGCAAAAGAG
AAATTGTTGCTCGACCCCGGATTCGGTTTCGGTAAAAATCTCTCTCACAATTATACCTTACTGGCGCGACTGGGTGAGTTTCATCATTTT
AACCTGCCGCTGCTGGTGGGCATGTCACGTAAAACGATGGTTGGTCAGTTACTTAACGTGGGACCATCAGACCGTCTGAACGGCAGCCTT
GCGTGCGCGGTAATTGCCGCGATGCAGGGCGCGCAGATCATTCGCGTCCATGACGTCAAAGAAACCGTAGAGGCGATGCGGGTGGTAGAA
GCCACTCTGTCTGCAAAGGGAAACAAACGCTATGAGTAA