bcrB

Accession ARO:3002988
CARD Short NamebcrB
DefinitionbcrB is an ABC transporter found in Bacillus licheniformis that confers bacitracin resistance.
AMR Gene FamilyATP-binding cassette (ABC) antibiotic efflux pump
Drug Classpeptide antibiotic
Resistance Mechanismantibiotic efflux
Efflux Componentefflux pump complex or subunit conferring antibiotic resistance
Classification9 ontology terms | Show
Parent Term(s)4 ontology terms | Show
+ ATP-binding cassette (ABC) antibiotic efflux pump [AMR Gene Family]
+ confers_resistance_to_antibiotic bacitracin A [Antibiotic]
+ confers_resistance_to_antibiotic bacitracin B [Antibiotic]
+ confers_resistance_to_antibiotic bacitracin F [Antibiotic]
Publications

Podlesek Z, et al. 1995. Mol Microbiol 16(5): 969-976. Bacillus licheniformis bacitracin-resistance ABC transporter: relationship to mammalian multidrug resistance. (PMID 7476193)

Resistomes

Prevalence of bcrB among the sequenced genomes, plasmids, and whole-genome shotgun assemblies available at NCBI or IslandViewer for 413 important pathogens (see methodological details and complete list of analyzed pathogens). Values reflect percentage of genomes, plasmids, genome islands, or whole-genome shotgun assemblies that have at least one hit to the AMR detection model. Default view includes percentages calculated based on Perfect plus Strict RGI hits. Select the checkbox to view percentages based on only Perfect matches to AMR reference sequences curated in CARD (note: this excludes resistance via mutation as references in protein variant models are often wild-type, sensitive sequences).

Prevalence: protein homolog model

SpeciesNCBI ChromosomeNCBI PlasmidNCBI WGSNCBI GI
No prevalence data


Detection Models

Model Type: protein homolog model

Model Definition: Protein Homolog Models (PHM) detect protein sequences based on their similarity to a curated reference sequence, using curated BLASTP bitscore cut-offs. Protein Homolog Models apply to all genes that confer resistance through their presence in an organism, such as the presence of a beta-lactamase gene on a plasmid. PHMs include a reference sequence and a bitscore cut-off for detection using BLASTP. A Perfect RGI match is 100% identical to the reference protein sequence along its entire length, a Strict RGI match is not identical but the bit-score of the matched sequence is greater than the curated BLASTP bit-score cutoff, Loose RGI matches have a bit-score less than the curated BLASTP bit-score cut-off.

Bit-score Cut-off (blastP): 370


>gb|AAA99505.1|+|bcrB [Bacillus licheniformis]
MAKKAKYPDVPIRFSETFSDTNLYIVLLIGVPLYGVITSYLFNREYAESTLKNLLTIPVSRISLIVSKLVLLLIWIMMLTLIAWVLTLLF
GLIGQFEGLSSAVLIEGFKQFMIGGALLFFLVSPIIFVTLLFKNYVPTIIFTIIISMVSIMVYGTEYSALFPWSAVWVIASGTFFPEYPP
EYSFISVAATTVLGLAATIVYFKKIDIH


>gb|L20573.1|+|1318-1944|bcrB [Bacillus licheniformis]
TTGGCTAAAAAAGCCAAGTACCCTGATGTACCGATTCGCTTCAGTGAGACCTTTTCCGATACCAACCTGTATATTGTGCTTTTGATCGGA
GTCCCGTTGTATGGTGTGATTACATCATATTTATTCAATCGGGAATACGCTGAAAGCACGCTAAAGAATCTATTGACGATTCCTGTTTCA
AGAATCAGCCTGATTGTCAGCAAATTGGTTCTGCTTCTCATTTGGATCATGATGCTGACGTTAATCGCCTGGGTGCTGACGCTGCTGTTC
GGGCTGATCGGTCAGTTTGAAGGGCTCAGTTCGGCGGTTTTAATTGAAGGGTTTAAACAATTTATGATAGGCGGGGCACTTCTTTTCTTC
CTGGTCAGTCCGATTATATTTGTGACACTGCTGTTTAAAAACTACGTGCCCACCATTATCTTTACGATCATTATATCAATGGTCAGCATT
ATGGTATACGGCACGGAATACAGCGCTTTATTCCCTTGGTCAGCGGTATGGGTGATCGCTTCGGGTACGTTCTTTCCGGAATATCCGCCC
GAATATTCTTTTATCAGTGTTGCCGCCACAACCGTTCTTGGATTAGCCGCGACAATCGTTTACTTTAAAAAAATCGATATTCATTGA