FOX-14

Accession ARO:3006472
CARD Short NameFOX-14
DefinitionFOX-14 is a FOX beta-lactamase.
AMR Gene FamilyFOX beta-lactamase
Drug Classcephalosporin
Resistance Mechanismantibiotic inactivation
Resistomes with Perfect MatchesProvidencia rettgeriwgs
Resistomes with Sequence VariantsProvidencia rettgeriwgs
Classification12 ontology terms | Show
Parent Term(s)1 ontology terms | Show
+ FOX beta-lactamase [AMR Gene Family]
Resistomes

Prevalence of FOX-14 among the sequenced genomes, plasmids, and whole-genome shotgun assemblies available at NCBI or IslandViewer for 414 important pathogens (see methodological details and complete list of analyzed pathogens). Values reflect percentage of genomes, plasmids, genome islands, or whole-genome shotgun assemblies that have at least one hit to the AMR detection model. Default view includes percentages calculated based on Perfect plus Strict RGI hits. Select the checkbox to view percentages based on only Perfect matches to AMR reference sequences curated in CARD (note: this excludes resistance via mutation as references in protein variant models are often wild-type, sensitive sequences).

Prevalence: protein homolog model (view sequences)

SpeciesNCBI ChromosomeNCBI PlasmidNCBI WGSNCBI GIGRDI-AMR2
Providencia rettgeri0%0%0.64%0%0%
Show Perfect Only


Detection Models

Model Type: protein homolog model

Model Definition: Protein Homolog Models (PHM) detect protein sequences based on their similarity to a curated reference sequence, using curated BLASTP bitscore cut-offs. Protein Homolog Models apply to all genes that confer resistance through their presence in an organism, such as the presence of a beta-lactamase gene on a plasmid. PHMs include a reference sequence and a bitscore cut-off for detection using BLASTP. A Perfect RGI match is 100% identical to the reference protein sequence along its entire length, a Strict RGI match is not identical but the bit-score of the matched sequence is greater than the curated BLASTP bit-score cutoff, Loose RGI matches have a bit-score less than the curated BLASTP bit-score cut-off.

Bit-score Cut-off (blastP): 700


>gb|WP_064511492.1|+|FOX-14 [Pseudomonas aeruginosa]
MQQRRAFALLTLGSLLLAPCTYAGGEAPLTAAVDGIIQPMLKEYRIPGMAVAVLKDGKAHYFNYGVANRESGQRVNEQTLFEIGSVSKTL
TATLGAYAAVKGGFELDDKVSQHGPWLKGSALDGVTMAELATYSAGGLPLQFPDEVDSNDKMRTYYQSWSPVYPAGTHRQYSNPSIGLFG
HLAANSLGQPFEQLMSQTLLPKLGLHHTYIQVPESAMVNYAYGYSKEDKPVRVTPGVLAAEAYGIKTGSADLLKFVEANMGYQGDAAVKS
AIALTHTGFYSVGEMTQGLGWESYAYPVTEQTLLAGNSPAVSFQANPVTRFAVPKAMGEQRLYNKTGSTGGFGAYVAFVPARGIAIVMLA
NRNYPIEARVKAAHAILSQLAE


>gb|NG_050814.1|+|1-1149|FOX-14 [Pseudomonas aeruginosa]
ATGCAACAACGACGTGCGTTCGCGCTACTGACGCTGGGTAGCCTGCTGCTAGCCCCTTGTACTTATGCCGGCGGGGAGGCTCCGCTGACC
GCCGCTGTGGACGGCATTATCCAGCCGATGCTCAAGGAGTATCGGATCCCGGGGATGGCGGTCGCCGTGCTGAAAGATGGCAAGGCCCAC
TATTTCAACTATGGGGTTGCCAACCGCGAGAGCGGCCAGCGGGTCAATGAGCAGACCCTGTTCGAGATTGGCTCGGTCAGCAAGACCCTG
ACAGCGACCCTCGGAGCCTATGCCGCGGTCAAGGGGGGCTTTGAGCTGGATGACAAGGTGAGCCAGCACGGCCCTTGGCTCAAAGGTTCC
GCCTTGGATGGTGTGACCATGGCCGAGCTTGCCACCTACAGTGCGGGTGGTTTGCCGCTGCAGTTCCCCGATGAGGTAGATTCGAATGAC
AAGATGCGCACTTACTATCAGAGCTGGTCACCGGTTTATCCGGCAGGGACCCATCGCCAGTATTCCAACCCCAGCATAGGCCTGTTTGGT
CACCTGGCCGCAAATAGTCTGGGCCAGCCATTTGAGCAACTGATGAGCCAGACCCTGCTGCCCAAGCTGGGTTTGCACCACACCTATATC
CAGGTGCCGGAGTCGGCCATGGTGAACTATGCCTACGGCTATTCGAAGGAAGATAAGCCCGTCCGGGTCACTCCGGGTGTGCTGGCGGCC
GAGGCTTACGGGATCAAGACCGGCTCGGCGGATCTGCTGAAGTTTGTCGAGGCCAACATGGGGTATCAGGGAGATGCCGCGGTAAAAAGC
GCAATCGCGCTGACCCACACCGGTTTCTACTCGGTGGGAGAAATGACCCAGGGATTAGGATGGGAGAGTTATGCCTATCCGGTGACCGAG
CAGACATTGCTGGCGGGCAATTCACCAGCGGTGAGCTTCCAGGCCAATCCGGTTACGCGCTTTGCGGTGCCCAAAGCGATGGGCGAGCAG
CGGCTCTATAACAAGACGGGCTCGACTGGCGGCTTTGGCGCCTATGTGGCGTTCGTGCCCGCCAGAGGGATAGCCATCGTCATGCTGGCC
AATCGCAACTATCCCATCGAGGCCAGGGTGAAGGCGGCTCACGCCATCCTGAGTCAGTTGGCCGAGTGA

Curator Acknowledgements
Curator Description Most Recent Edit