OXA-347

Accession ARO:3001777
CARD Short NameOXA-347
DefinitionOXA-347 is a beta-lactamase found in Enterobacteriaceae.
AMR Gene FamilyOXA beta-lactamase
Drug Classpenam
Resistance Mechanismantibiotic inactivation
Resistomes with Perfect MatchesBacteroides caccaewgs, Bacteroides fragilisg+wgs+gi, Bacteroides ovatusp+wgs, Bacteroides thetaiotaomicrong+p+wgs, Elizabethkingia anophelisg+wgs, Myroides odoratimimusg, Myroides phaeusg+wgs+gi, Parabacteroides distasoniswgs, Phocaeicola vulgatuswgs, Sphingobacterium hotanenseg+gi
Resistomes with Sequence VariantsBacteroides caccaewgs, Bacteroides fragilisg+wgs+gi, Bacteroides ovatusp+wgs, Bacteroides thetaiotaomicrong+p+wgs, Elizabethkingia anophelisg+wgs, Myroides odoratimimusg, Myroides phaeusg+wgs+gi, Parabacteroides distasoniswgs, Phocaeicola doreiwgs, Phocaeicola vulgatuswgs, Sphingobacterium hotanenseg+gi
Classification13 ontology terms | Show
Parent Term(s)1 ontology terms | Show
+ OXA beta-lactamase [AMR Gene Family]
Publications

Cheng G, et al. 2012. FEMS Microbiol Lett 336(1): 11-16. Functional screening of antibiotic resistance genes from human gut microbiota reveals a novel gene fusion. (PMID 22845886)

Resistomes

Prevalence of OXA-347 among the sequenced genomes, plasmids, and whole-genome shotgun assemblies available at NCBI or IslandViewer for 413 important pathogens (see methodological details and complete list of analyzed pathogens). Values reflect percentage of genomes, plasmids, genome islands, or whole-genome shotgun assemblies that have at least one hit to the AMR detection model. Default view includes percentages calculated based on Perfect plus Strict RGI hits. Select the checkbox to view percentages based on only Perfect matches to AMR reference sequences curated in CARD (note: this excludes resistance via mutation as references in protein variant models are often wild-type, sensitive sequences).

Prevalence: protein homolog model (view sequences)

SpeciesNCBI ChromosomeNCBI PlasmidNCBI WGSNCBI GI
Bacteroides caccae0%0%3.75%0%
Bacteroides fragilis7.69%0%1.33%9.09%
Bacteroides ovatus0%2.94%0.38%0%
Bacteroides thetaiotaomicron3.57%2.27%2.45%0%
Elizabethkingia anophelis7.69%0%2.06%0%
Escherichia coli0%0%0%0%
Myroides odoratimimus50%0%0%0%
Myroides phaeus100%0%100%50%
Parabacteroides distasonis0%0%1.87%0%
Phocaeicola dorei0%0%2.08%0%
Phocaeicola vulgatus0%0%2.51%0%
Sphingobacterium hotanense100%0%0%100%
Show Perfect Only


Detection Models

Model Type: protein homolog model

Model Definition: Protein Homolog Models (PHM) detect protein sequences based on their similarity to a curated reference sequence, using curated BLASTP bitscore cut-offs. Protein Homolog Models apply to all genes that confer resistance through their presence in an organism, such as the presence of a beta-lactamase gene on a plasmid. PHMs include a reference sequence and a bitscore cut-off for detection using BLASTP. A Perfect RGI match is 100% identical to the reference protein sequence along its entire length, a Strict RGI match is not identical but the bit-score of the matched sequence is greater than the curated BLASTP bit-score cutoff, Loose RGI matches have a bit-score less than the curated BLASTP bit-score cut-off.

Bit-score Cut-off (blastP): 500


>gb|AET35493.1|-|OXA-347 [uncultured bacterium]
MKNILFVVFISMIFLFVCCNTTTNKNIIETEISDFDKILDSFQVNGSILIYDNDKNTFYSNDFDWAKNGKLPASTFKIPNSIIAVELGII
ENDTTILKWNGEQRKMDIWEKDLSFKDAFRISCVPCYQEIARKIGTIKMKEYLEKFEYKNMIFDSLTIDNFWLEGNSKISQKQQIDFLRK
FYFSKFPISDRTIKIVKNIMEIERTENYILSGKTGLSSIEEKYNGWFVGYVETKSNVYFFATNVIPTDGLNVDDFISSRINVTKNALKQM
NIMK


>gb|JN086160.1|-|1583-2407|OXA-347 [uncultured bacterium]
ATGAAAAATATTTTATTTGTAGTTTTTATTTCAATGATATTTTTATTTGTTTGCTGTAACACAACAACGAATAAAAACATAATTGAAACA
GAAATTTCTGATTTTGACAAAATTTTAGATAGTTTTCAAGTAAATGGTTCAATTCTAATTTATGATAACGACAAGAATACTTTTTACTCA
AATGACTTTGATTGGGCTAAAAACGGAAAATTACCTGCATCAACATTCAAAATTCCAAATTCTATAATTGCTGTTGAATTAGGCATTATT
GAAAATGATACAACTATTTTAAAATGGAATGGCGAGCAGAGAAAAATGGATATTTGGGAAAAAGATTTATCATTTAAAGATGCTTTTAGA
ATTTCCTGTGTTCCTTGCTATCAGGAAATTGCAAGGAAAATCGGAACAATTAAAATGAAAGAATATTTAGAAAAATTTGAGTATAAAAAT
ATGATTTTTGACAGTTTAACGATTGACAATTTTTGGCTTGAAGGAAATTCAAAAATATCTCAAAAACAACAAATCGACTTTTTAAGGAAA
TTCTATTTTTCAAAATTTCCAATTTCTGATAGGACAATAAAGATTGTCAAAAATATTATGGAAATTGAGCGAACTGAAAATTACATTTTA
AGCGGTAAGACTGGATTAAGTTCGATAGAAGAAAAATATAATGGTTGGTTTGTTGGTTATGTTGAAACAAAATCTAATGTTTATTTTTTT
GCAACAAATGTAATTCCGACAGACGGATTGAATGTTGATGATTTTATTTCATCGAGAATTAATGTAACAAAAAATGCGTTAAAGCAAATG
AATATAATGAAATGA