OXA-129

Accession ARO:3001811
CARD Short NameOXA-129
DefinitionOXA-129 is a beta-lactamase found in Salmonella enterica.
AMR Gene FamilyOXA beta-lactamase, OXA-5-like beta-lactamase
Drug Classpenam
Resistance Mechanismantibiotic inactivation
Resistomes with Perfect MatchesEnterobacter hormaecheip+wgs, Pseudomonas aeruginosag+wgs+gi
Resistomes with Sequence VariantsEnterobacter hormaecheip+wgs, Pseudomonas aeruginosag+wgs+gi
Classification14 ontology terms | Show
Parent Term(s)1 ontology terms | Show
+ OXA-5-like beta-lactamase [AMR Gene Family]
Publications

Michael GB, et al. 2008. Int J Antimicrob Agents 32(2): 120-129. Molecular analysis of multiresistant porcine Salmonella enterica subsp. enterica serovar Bredeney isolates from Southern Brazil: identification of resistance genes, integrons and a group II intron. (PMID 18571903)

Resistomes

Prevalence of OXA-129 among the sequenced genomes, plasmids, and whole-genome shotgun assemblies available at NCBI or IslandViewer for 413 important pathogens (see methodological details and complete list of analyzed pathogens). Values reflect percentage of genomes, plasmids, genome islands, or whole-genome shotgun assemblies that have at least one hit to the AMR detection model. Default view includes percentages calculated based on Perfect plus Strict RGI hits. Select the checkbox to view percentages based on only Perfect matches to AMR reference sequences curated in CARD (note: this excludes resistance via mutation as references in protein variant models are often wild-type, sensitive sequences).

Prevalence: protein homolog model (view sequences)

SpeciesNCBI ChromosomeNCBI PlasmidNCBI WGSNCBI GI
Enterobacter hormaechei0%0.13%0.47%0%
Pseudomonas aeruginosa0.77%0%0.34%2.78%
Show Perfect Only


Detection Models

Model Type: protein homolog model

Model Definition: Protein Homolog Models (PHM) detect protein sequences based on their similarity to a curated reference sequence, using curated BLASTP bitscore cut-offs. Protein Homolog Models apply to all genes that confer resistance through their presence in an organism, such as the presence of a beta-lactamase gene on a plasmid. PHMs include a reference sequence and a bitscore cut-off for detection using BLASTP. A Perfect RGI match is 100% identical to the reference protein sequence along its entire length, a Strict RGI match is not identical but the bit-score of the matched sequence is greater than the curated BLASTP bit-score cutoff, Loose RGI matches have a bit-score less than the curated BLASTP bit-score cut-off.

Bit-score Cut-off (blastP): 500


>gb|CAP69660.1|+|OXA-129 [Salmonella enterica subsp. enterica serovar Bredeney]
MKTIAAYLVLVFFAGTALSESISENLAWNKEFSSESVHGVFVLCKSSSNSCTTNNATRASTAYIPASTFKIPNALIGLETGAIKDARQVF
KWDGKPRAMKQWEKDLTLRGAIQVSAVPVFQQIARDIGKKRMQKYLNLFSYGNANIGGGIDKFWLEGQLRISAVNQVKFLESLYLNNLPA
SKANQLIVKEAIVTEATPEYIVHSKTGYSGVGTESNPGVAWWVGWVEKGTEVYFFAFNMDIDNESKLPSRKSIPTKIMASEGIIIGG


>gb|AM932669.1|+|699-1502|OXA-129 [Salmonella enterica subsp. enterica serovar Bredeney]
ATGAAAACCATAGCCGCATATTTAGTTCTAGTATTTTTTGCAGGCACTGCACTTTCAGAGTCTATTTCTGAAAATTTAGCTTGGAATAAA
GAATTTTCCAGTGAATCAGTGCATGGTGTTTTTGTACTTTGTAAAAGCAGTAGTAATTCCTGTACAACAAATAATGCAACACGTGCATCT
ACGGCCTATATTCCAGCATCAACATTCAAAATTCCCAATGCTCTCATAGGCCTTGAAACCGGCGCCATAAAAGATGCGCGGCAGGTTTTC
AAATGGGACGGCAAGCCCAGAGCCATGAAGCAATGGGAAAAAGACTTAACGCTAAGGGGCGCTATACAAGTTTCTGCTGTTCCGGTATTT
CAACAAATTGCCAGAGACATTGGCAAAAAAAGAATGCAAAAATACCTTAACCTTTTTTCATATGGCAACGCCAATATAGGCGGAGGCATT
GACAAATTTTGGCTAGAAGGTCAGCTTAGAATCTCAGCAGTCAATCAAGTTAAATTTTTAGAGTCGCTTTACCTAAATAATTTGCCAGCA
TCTAAAGCAAACCAACTTATAGTAAAAGAGGCAATAGTTACAGAAGCAACTCCAGAATATATAGTGCATTCAAAAACCGGGTATTCCGGT
GTGGGCACAGAATCAAATCCTGGTGTCGCTTGGTGGGTTGGTTGGGTAGAAAAAGGAACTGAGGTTTACTTTTTTGCATTTAACATGGAC
ATAGACAATGAGAGTAAGTTGCCGTCAAGAAAATCCATTCCAACGAAAATCATGGCAAGTGAAGGTATCATCATTGGTGGCTAA