mphI

Accession ARO:3003991
CARD Short NamemphI
DefinitionmphI is a macrolide phosphotransferase protein found in Paenibacillus sp. LC231, a strain of Paenibacillus isolated from Lechuguilla Cave, NM, USA. Confers resistance to macrolide antibiotics. Described by Pawlowski et al. 2016.
AMR Gene Familymacrolide phosphotransferase (MPH)
Drug Classmacrolide antibiotic
Resistance Mechanismantibiotic inactivation
Classification9 ontology terms | Show
Parent Term(s)4 ontology terms | Show
+ macrolide phosphotransferase (MPH) [AMR Gene Family]
+ confers_resistance_to_antibiotic erythromycin [Antibiotic]
+ confers_resistance_to_antibiotic telithromycin [Antibiotic]
+ confers_resistance_to_antibiotic tylosin [Antibiotic]
Publications

Pawlowski AC, et al. 2016. Nat Commun 7:13803 A diverse intrinsic antibiotic resistome from a cave bacterium. (PMID 27929110)

Pawlowski AC, et al. 2018. Nat Commun 9(1):112 The evolution of substrate discrimination in macrolide antibiotic resistance enzymes. (PMID 29317655)

Resistomes

Prevalence of mphI among the sequenced genomes, plasmids, and whole-genome shotgun assemblies available at NCBI or IslandViewer for 413 important pathogens (see methodological details and complete list of analyzed pathogens). Values reflect percentage of genomes, plasmids, genome islands, or whole-genome shotgun assemblies that have at least one hit to the AMR detection model. Default view includes percentages calculated based on Perfect plus Strict RGI hits. Select the checkbox to view percentages based on only Perfect matches to AMR reference sequences curated in CARD (note: this excludes resistance via mutation as references in protein variant models are often wild-type, sensitive sequences).

Prevalence: protein homolog model

SpeciesNCBI ChromosomeNCBI PlasmidNCBI WGSNCBI GI
No prevalence data


Detection Models

Model Type: protein homolog model

Model Definition: Protein Homolog Models (PHM) detect protein sequences based on their similarity to a curated reference sequence, using curated BLASTP bitscore cut-offs. Protein Homolog Models apply to all genes that confer resistance through their presence in an organism, such as the presence of a beta-lactamase gene on a plasmid. PHMs include a reference sequence and a bitscore cut-off for detection using BLASTP. A Perfect RGI match is 100% identical to the reference protein sequence along its entire length, a Strict RGI match is not identical but the bit-score of the matched sequence is greater than the curated BLASTP bit-score cutoff, Loose RGI matches have a bit-score less than the curated BLASTP bit-score cut-off.

Bit-score Cut-off (blastP): 500

Type of Antibiotic Resistance: Intrinsic or chromosomally-encoded


>gb|APB03226.1|+|mphI [Paenibacillus sp. LC231]
MTIAKPNDDYTQVIQEMLEIAGKHGVNLIPEGIEMNESGMDFLVGFAEEAGTGARWILRKPRRPDVLDRADNEARVLKLIQSHLSVDVPD
WRIYTPELIAYPLLSGQPAASVSMEGYAWNMDHENPGDGFIRSLAEALVALHGVDHDAARAAGLRVKSPQEVRDETARNMEDIKSRLGVS
DALWERWQKWLEEDSYWPTHSALIHGDLHPPHILIDERVQVTGLLDWTESEVASPAKDFVLYYAIYGEHNLRVLLDRYEQAGGKVWPRMF
DHIVEQHAAYPVLIAQFALLTGQEEYMTMARNALGLTE


>gb|KX531056.1|+|1-927|mphI [Paenibacillus sp. LC231]
ATGACAATAGCAAAACCAAATGATGATTATACACAAGTGATCCAAGAGATGCTGGAGATTGCCGGAAAACACGGGGTGAATTTGATTCCG
GAGGGAATAGAGATGAATGAATCCGGCATGGATTTCCTTGTTGGATTCGCAGAGGAGGCAGGGACTGGAGCACGGTGGATTCTGCGGAAA
CCGAGACGACCGGATGTGCTGGATAGAGCAGATAACGAAGCTAGGGTCCTGAAGCTGATTCAATCCCATCTTTCGGTTGATGTACCGGAT
TGGCGGATTTACACGCCGGAGCTCATCGCCTATCCGCTGCTTAGCGGGCAGCCTGCCGCTTCCGTCAGCATGGAAGGATATGCATGGAAT
ATGGATCATGAGAATCCGGGCGACGGGTTTATCCGCTCACTGGCTGAAGCGCTGGTTGCCTTGCATGGCGTCGATCATGATGCAGCCCGA
GCAGCAGGTCTGCGGGTAAAGAGTCCCCAAGAGGTTCGTGATGAGACGGCGCGAAATATGGAAGACATCAAGAGCCGTCTGGGCGTTTCC
GATGCGCTGTGGGAGAGATGGCAAAAATGGCTGGAGGAGGATTCCTATTGGCCGACGCATTCTGCCCTCATCCATGGCGATCTTCATCCC
CCGCATATCCTGATTGATGAGCGCGTGCAGGTGACCGGACTTTTGGATTGGACGGAGTCCGAGGTAGCAAGTCCCGCCAAAGACTTCGTG
TTATACTACGCTATTTATGGCGAGCATAATCTCCGTGTCCTGTTGGACCGGTATGAACAAGCCGGAGGGAAGGTATGGCCGCGCATGTTC
GATCATATTGTCGAACAGCATGCCGCGTATCCCGTGCTGATCGCCCAGTTCGCTCTCCTGACAGGCCAGGAAGAGTATATGACGATGGCG
CGGAATGCTCTGGGTTTGACGGAGTAA