OXA-181

Accession ARO:3001784
CARD Short NameOXA-181
DefinitionOXA-181 is a beta-lactamase found in Klebsiella pneumoniae.
AMR Gene FamilyOXA beta-lactamase, OXA-48-like beta-lactamase
Drug Classpenicillin beta-lactam, carbapenem
Resistance Mechanismantibiotic inactivation
Resistomes with Perfect MatchesCitrobacter portucalensiswgs, Enterobacter cloacaep+wgs, Enterobacter hormaecheip+wgs, Escherichia colip+wgs, Klebsiella michiganensiswgs, Klebsiella pneumoniaeg+p+wgs, Klebsiella quasipneumoniaep+wgs, Morganella morganiip+wgs, Serratia marcescenswgs
Resistomes with Sequence VariantsCitrobacter portucalensiswgs, Enterobacter cloacaep+wgs, Enterobacter hormaecheip+wgs, Escherichia colip+wgs, Klebsiella michiganensiswgs, Klebsiella pneumoniaeg+p+wgs, Klebsiella quasipneumoniaep+wgs, Morganella morganiip+wgs, Serratia marcescenswgs, Shewanella putrefaciensgi
Classification16 ontology terms | Show
Parent Term(s)1 ontology terms | Show
+ OXA-48-like beta-lactamase [AMR Gene Family]
Publications

Potron A, et al. 2011. Antimicrob Agents Chemother 55(10): 4896-4899. Characterization of OXA-181, a carbapenem-hydrolyzing class D beta-lactamase from Klebsiella pneumoniae. (PMID 21768505)

Resistomes

Prevalence of OXA-181 among the sequenced genomes, plasmids, and whole-genome shotgun assemblies available at NCBI or IslandViewer for 414 important pathogens (see methodological details and complete list of analyzed pathogens). Values reflect percentage of genomes, plasmids, genome islands, or whole-genome shotgun assemblies that have at least one hit to the AMR detection model. Default view includes percentages calculated based on Perfect plus Strict RGI hits. Select the checkbox to view percentages based on only Perfect matches to AMR reference sequences curated in CARD (note: this excludes resistance via mutation as references in protein variant models are often wild-type, sensitive sequences).

Prevalence: protein homolog model (view sequences)

SpeciesNCBI ChromosomeNCBI PlasmidNCBI WGSNCBI GIGRDI-AMR2
Citrobacter portucalensis0%0%1.8%0%0%
Enterobacter cloacae0%0.56%0.96%0%0%
Enterobacter hormaechei0%0.06%0.39%0%0%
Escherichia coli0%0.25%0.49%0%0%
Klebsiella michiganensis0%0%0.8%0%0%
Klebsiella pneumoniae0.71%0.37%1.13%0%0%
Klebsiella quasipneumoniae0%0.42%0.53%0%0%
Morganella morganii0%2.5%0.61%0%0%
Serratia marcescens0%0%0.26%0%0%
Shewanella putrefaciens0%0%0%50%0%
Show Perfect Only


Detection Models

Model Type: protein homolog model

Model Definition: Protein Homolog Models (PHM) detect protein sequences based on their similarity to a curated reference sequence, using curated BLASTP bitscore cut-offs. Protein Homolog Models apply to all genes that confer resistance through their presence in an organism, such as the presence of a beta-lactamase gene on a plasmid. PHMs include a reference sequence and a bitscore cut-off for detection using BLASTP. A Perfect RGI match is 100% identical to the reference protein sequence along its entire length, a Strict RGI match is not identical but the bit-score of the matched sequence is greater than the curated BLASTP bit-score cutoff, Loose RGI matches have a bit-score less than the curated BLASTP bit-score cut-off.

Bit-score Cut-off (blastP): 500


>gb|AEP16366.1|+|OXA-181 [Klebsiella pneumoniae]
MRVLALSAVFLVASIIGMPAVAKEWQENKSWNAHFTEHKSQGVVVLWNENKQQGFTNNLKRANQAFLPASTFKIPNSLIALDLGVVKDEH
QVFKWDGQTRDIAAWNRDHDLITAMKYSVVPVYQEFARQIGEARMSKMLHAFDYGNEDISGNVDSFWLDGGIRISATQQIAFLRKLYHNK
LHVSERSQRIVKQAMLTEANGDYIIRAKTGYSTRIEPKIGWWVGWVELDDNVWFFAMNMDMPTSDGLGLRQAITKEVLKQEKIIP


>gb|JN205800.1|+|4141-4938|OXA-181 [Klebsiella pneumoniae]
ATGCGTGTATTAGCCTTATCGGCTGTGTTTTTGGTGGCATCGATTATCGGAATGCCAGCGGTAGCAAAGGAATGGCAAGAAAACAAAAGT
TGGAATGCTCACTTTACTGAACATAAATCACAGGGCGTAGTTGTGCTCTGGAATGAGAATAAGCAGCAAGGATTTACCAATAATCTTAAA
CGGGCGAACCAAGCATTTTTACCCGCATCTACCTTTAAAATTCCCAATAGCTTGATCGCCCTCGATTTGGGCGTGGTTAAGGATGAACAC
CAAGTCTTTAAGTGGGATGGACAGACGCGTGATATCGCCGCTTGGAATCGTGACCATGACTTAATTACCGCGATGAAGTACTCAGTTGTG
CCTGTTTATCAAGAATTTGCCCGCCAAATTGGTGAGGCACGTATGAGTAAAATGCTGCACGCCTTCGATTATGGCAATGAGGATATCTCG
GGCAATGTAGACAGTTTTTGGCTCGATGGTGGTATTCGCATTTCGGCTACCCAGCAAATCGCTTTTTTACGCAAGCTGTATCACAACAAG
CTGCACGTTTCTGAGCGTAGTCAGCGCATCGTGAAACAAGCCATGCTGACCGAAGCCAATGGCGACTATATTATTCGGGCTAAAACGGGA
TACTCGACTAGAATCGAACCTAAGATTGGCTGGTGGGTTGGTTGGGTTGAACTTGATGATAATGTGTGGTTTTTTGCGATGAATATGGAT
ATGCCCACATCGGATGGTTTAGGGCTGCGCCAAGCCATCACAAAAGAAGTGCTCAAACAGGAGAAAATTATTCCCTAG

Curator Acknowledgements
Curator Description Most Recent Edit