AAC(3)-IIIb

Accession ARO:3002537
CARD Short NameAAC(3)-IIIb
DefinitionAAC(3)-IIIb is an aminoglycoside acetyltransferase in P. aeruginosa.
AMR Gene FamilyAAC(3)
Drug Classaminoglycoside antibiotic
Resistance Mechanismantibiotic inactivation
Resistomes with Perfect MatchesPseudomonas aeruginosawgs
Resistomes with Sequence VariantsPseudomonas aeruginosawgs
Classification12 ontology terms | Show
Parent Term(s)10 ontology terms | Show
+ confers_resistance_to_antibiotic neomycin [Antibiotic]
+ confers_resistance_to_antibiotic dibekacin [Antibiotic]
+ confers_resistance_to_antibiotic sisomicin [Antibiotic]
+ confers_resistance_to_antibiotic kanamycin A [Antibiotic]
+ confers_resistance_to_antibiotic tobramycin [Antibiotic]
+ confers_resistance_to_antibiotic paromomycin [Antibiotic]
+ confers_resistance_to_antibiotic lividomycin [Antibiotic]
+ confers_resistance_to_antibiotic 5-episisomicin [Antibiotic]
+ confers_resistance_to_antibiotic gentamicin [Antibiotic]
+ AAC(3)-III
Publications

Norris AL, et al. 2010. Biochemistry 49(19): 4027-4035. Thermodynamics and kinetics of association of antibiotics with the aminoglycoside acetyltransferase (3)-IIIb, a resistance-causing enzyme. (PMID 20387903)

Resistomes

Prevalence of AAC(3)-IIIb among the sequenced genomes, plasmids, and whole-genome shotgun assemblies available at NCBI or IslandViewer for 413 important pathogens (see methodological details and complete list of analyzed pathogens). Values reflect percentage of genomes, plasmids, genome islands, or whole-genome shotgun assemblies that have at least one hit to the AMR detection model. Default view includes percentages calculated based on Perfect plus Strict RGI hits. Select the checkbox to view percentages based on only Perfect matches to AMR reference sequences curated in CARD (note: this excludes resistance via mutation as references in protein variant models are often wild-type, sensitive sequences).

Prevalence: protein homolog model (view sequences)

SpeciesNCBI ChromosomeNCBI PlasmidNCBI WGSNCBI GI
Pseudomonas aeruginosa0%0%0.03%0%
Show Perfect Only


Detection Models

Model Type: protein homolog model

Model Definition: Protein Homolog Models (PHM) detect protein sequences based on their similarity to a curated reference sequence, using curated BLASTP bitscore cut-offs. Protein Homolog Models apply to all genes that confer resistance through their presence in an organism, such as the presence of a beta-lactamase gene on a plasmid. PHMs include a reference sequence and a bitscore cut-off for detection using BLASTP. A Perfect RGI match is 100% identical to the reference protein sequence along its entire length, a Strict RGI match is not identical but the bit-score of the matched sequence is greater than the curated BLASTP bit-score cutoff, Loose RGI matches have a bit-score less than the curated BLASTP bit-score cut-off.

Bit-score Cut-off (blastP): 500


>gb|KSC15183.1|-|AAC(3)-IIIb [Pseudomonas aeruginosa]
MTPASFVTRASLAADLASLGLAPGDAVMVHAAVSKVGRLLDGPDTIISALSDAVGPEGTVLAYADWEARYEELADEHGRVPVQWRDHIPP
FDPQRSRAIRDNGVLPEFLRTTPGALRSGNPGASVVALGAKAEWFTADHPLDYGYGEGSPLAKLVAAGGRVLMLGAPLDTLTLLHHAEHL
ADIPGKRIKRIEVPFATPTGTQWRMIEEFDTGDPIVAGLAEDYFAGIVTEFLASGQGRQGLIGAAPSVLVDAAAITAFGVTWLEKRFGTP
SP


>gb|LLLC01000048.1|-|353-1171|AAC(3)-IIIb [Pseudomonas aeruginosa]
ATGACGCCCGCCTCCTTCGTCACGCGCGCCTCGCTCGCCGCCGACCTTGCCAGCCTTGGCCTTGCTCCCGGCGACGCCGTGATGGTCCAC
GCTGCCGTCAGCAAGGTTGGCCGCCTGCTCGACGGCCCCGATACGATCATCAGCGCCCTCTCCGACGCCGTCGGCCCGGAGGGCACGGTC
CTCGCCTATGCCGATTGGGAAGCGCGCTACGAGGAACTGGCGGACGAGCACGGGCGCGTACCGGTGCAATGGCGCGATCATATCCCGCCT
TTCGATCCGCAGCGCTCGCGCGCCATCCGCGACAATGGCGTGCTGCCGGAATTCCTGCGGACGACGCCGGGCGCACTGCGCAGCGGCAAT
CCCGGCGCTTCGGTGGTGGCGCTCGGCGCAAAGGCGGAATGGTTCACCGCCGATCACCCGCTCGACTACGGCTATGGCGAGGGCTCGCCA
CTGGCCAAGCTGGTCGCCGCCGGTGGCAGGGTGCTGATGCTCGGAGCACCGCTCGACACGCTGACCCTGCTGCACCATGCCGAGCATCTG
GCTGATATCCCCGGCAAGCGGATCAAGCGGATCGAGGTGCCGTTCGCGACACCTACAGGCACGCAATGGCGCATGATCGAGGAGTTCGAC
ACCGGCGATCCGATCGTCGCAGGGCTGGCCGAGGACTATTTCGCGGGAATCGTGACCGAATTCCTCGCCAGCGGCCAGGGTCGGCAAGGG
TTGATCGGCGCCGCTCCCTCGGTGCTGGTCGATGCCGCAGCGATCACCGCCTTCGGCGTCACCTGGCTCGAAAAACGGTTCGGTACGCCC
TCGCCCTGA