clindamycin [Antibiotic]

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Accession ARO:0000066
Synonym(s)Chlolincocin Chlorlincocin Cleocin CLI Clindamicina Clindamycine Clindamycinum Clinimycin Sobelin
DefinitionClindamycin is a lincosamide antibiotic that blocks A-site aminoacyl-tRNA binding. It is usually used to treat infections with anaerobic bacteria but can also be used to treat some protozoal diseases, such as malaria.
SMILESN/A
PubChem446598
Drug Classlincosamide antibiotic
Classification2 ontology terms | Show
Parent Term(s)1 ontology terms | Show
+ lincosamide antibiotic [Drug Class]
Sub-Term(s)
63 ontology terms | Show
+ antibiotic sensitive peptidyl transferase (23S rRNA) targeted_by_antibiotic
+ lsaA confers_resistance_to_antibiotic
+ ErmC confers_resistance_to_antibiotic
+ ErmE confers_resistance_to_antibiotic
+ ErmA confers_resistance_to_antibiotic
+ ErmB confers_resistance_to_antibiotic
+ Erm(37) confers_resistance_to_antibiotic
+ ErmD confers_resistance_to_antibiotic
+ ErmF confers_resistance_to_antibiotic
+ ErmG confers_resistance_to_antibiotic
+ ErmN confers_resistance_to_antibiotic
+ ErmQ confers_resistance_to_antibiotic
+ ErmR confers_resistance_to_antibiotic
+ ErmT confers_resistance_to_antibiotic
+ ErmX confers_resistance_to_antibiotic
+ Erm(33) confers_resistance_to_antibiotic
+ Erm(34) confers_resistance_to_antibiotic
+ Erm(38) confers_resistance_to_antibiotic
+ Erm(39) confers_resistance_to_antibiotic
+ Erm(41) confers_resistance_to_antibiotic
+ Erm(35) confers_resistance_to_antibiotic
+ Erm(36) confers_resistance_to_antibiotic
+ cfr(B) confers_resistance_to_antibiotic
+ LlmA 23S ribosomal RNA methyltransferase confers_resistance_to_antibiotic
+ cipA confers_resistance_to_antibiotic
+ cfrA confers_resistance_to_antibiotic
+ clbA confers_resistance_to_antibiotic
+ clbB confers_resistance_to_antibiotic
+ clbC confers_resistance_to_antibiotic
+ clcD confers_resistance_to_antibiotic
+ Escherichia coli 23S rRNA with mutation conferring resistance to clindamycin confers_resistance_to_antibiotic
+ Clostridioides difficile 23S rRNA with mutation conferring resistance to erythromycin and clindamycin confers_resistance_to_antibiotic
+ lmrC confers_resistance_to_antibiotic
+ lsaB confers_resistance_to_antibiotic
+ lsaC confers_resistance_to_antibiotic
+ salA confers_resistance_to_antibiotic
+ salB confers_resistance_to_antibiotic
+ salC confers_resistance_to_antibiotic
+ Erm(42) confers_resistance_to_antibiotic
+ Erm(43) confers_resistance_to_antibiotic
+ Erm(44)v confers_resistance_to_antibiotic
+ Erm(47) confers_resistance_to_antibiotic
+ Erm(48) confers_resistance_to_antibiotic
+ Erm(49) confers_resistance_to_antibiotic
+ Erm(50) confers_resistance_to_antibiotic
+ Erm(51) confers_resistance_to_antibiotic
+ Erm(52) confers_resistance_to_antibiotic
+ erm(40) confers_resistance_to_antibiotic
+ erm(45) confers_resistance_to_antibiotic
+ lnuB confers_resistance_to_antibiotic
+ lnuD confers_resistance_to_antibiotic
+ lnuF confers_resistance_to_antibiotic
+ lsaD confers_resistance_to_antibiotic
+ vga(E) Staphylococcus cohnii confers_resistance_to_antibiotic
+ vgaA confers_resistance_to_antibiotic
+ vgaALC confers_resistance_to_antibiotic
+ vgaC confers_resistance_to_antibiotic
+ vgaE confers_resistance_to_antibiotic
+ LnuH confers_resistance_to_antibiotic
+ Clostridioides difficile cplR confers_resistance_to_antibiotic
+ Clostridium perfringes cplR confers_resistance_to_antibiotic
+ Clostridium sporogenes cplR confers_resistance_to_antibiotic
+ erm(56) confers_resistance_to_antibiotic
Publications

Dunkle JA, et al. 2010. Proc Natl Acad Sci U S A 107(40): 17152-17157. Structures of the Escherichia coli ribosome with antibiotics bound near the peptidyl transferase center explain spectra of drug action. (PMID 20876128)

Curator Acknowledgements
Curator Description Most Recent Edit